PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19589
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family CAMTA
Protein Properties Length: 1062aa    MW: 121286 Da    PI: 7.1203
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19589genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1182.26.1e-57201363118
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 +e ++rwl++ ei++iL n++k++++ e+++rp++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fqrr+yw
  PEQU_19589  20 REaQHRWLRPAEICEILRNYHKFRIAPEPPNRPSNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYW 118
                 4449*********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylevk 118
                 +Leeel +ivlvhy+evk
  PEQU_19589 119 MLEEELMHIVLVHYREVK 136
                 ***************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143784.415141IPR005559CG-1 DNA-binding domain
SMARTSM010763.8E-8118136IPR005559CG-1 DNA-binding domain
PfamPF038598.5E-5021134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.4E-7479569IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.45E-15481566IPR014756Immunoglobulin E-set
PfamPF018331.2E-5481566IPR002909IPT domain
CDDcd002042.77E-14639770No hitNo description
Gene3DG3DSA:1.25.40.205.1E-18658774IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029717.449669772IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.35E-17669772IPR020683Ankyrin repeat-containing domain
PfamPF127961.1E-7683773IPR020683Ankyrin repeat-containing domain
SMARTSM002480.035711740IPR002110Ankyrin repeat
SMARTSM00248430750779IPR002110Ankyrin repeat
SuperFamilySSF525402.92E-8874931IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.19880902IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.334882910IPR000048IQ motif, EF-hand binding site
PfamPF006125.5E-4882901IPR000048IQ motif, EF-hand binding site
SMARTSM000150.001903925IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.597904928IPR000048IQ motif, EF-hand binding site
PfamPF006121.0E-4906925IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010150Biological Processleaf senescence
GO:0042742Biological Processdefense response to bacterium
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 1062 aa     Download sequence    Send to blast
MADGRRLGLT PQLDIEQILR EAQHRWLRPA EICEILRNYH KFRIAPEPPN RPSNGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
EEELMHIVLV HYREVKGGKA SYLQQREDGE SIRNSNPDSP ACSNSSVNLS QVPSQISDYG  180
SPNSTHQSEY EDADSDNYQS STRYHSVPEV QQYGSWMNVQ LSDTRVPAPT RHDQCDHQRP  240
QAAIPNLDSF TIARDSMTKI ENPSDVGLTF TRSNTKTDIA SWHDMMESCP AGFQTPYDLS  300
VPSSWAATFE DNLERNSFMI QDFLAGDFGT HKEDGTALAS NIIIVWNVVK CPLILILMNG  360
YFVKKQLFLT CFSFFSFFSQ FSANESDSLV ENSQATEENV NQMSDLSNKE HEGLKKYDSF  420
SRWMSKELGE VDDSQINSNS GIYWSSLESE SVVAESNLLN QEQSDTYLMG PLLSQEQLFS  480
IIDFSPNWAY TDLVTKVIVK GKFLMNEEDL QKYKWSCMFG EIEVAANILA NGTLSCYTPP  540
HKSGRVPFYI TCSNRVACSE IREFEYKKDL SRSVGIDDLS NSILQSRFEK LLLLDSMDYS  600
IPACSHLNER SHADCTICSL IMEVDDETIN LFKHDEDFLH VGMKNEDIVS QLKQKLRVWL  660
LHKVGEGDGK GPNVLDEEGQ GVLHLAAALG YDWAIKPTVA AGVNINFRDV HGWTAMHWAA  720
SCGRERTVVT LIALDASPGA LTDPTPEFPT GRTPADLASR NGHKGIAGFL AESSLTNHLR  780
ALNLKGTEKH NLSKPDSLLG FENLPDRINA NLTDGEIQTS LRAVRNATEA AARIFQVFRV  840
QSFNRKQIIK QSDEKFGMSE DRALSLISVK PYKSEQHNMP FHAAAIKIQN KFRGWKGRKE  900
FLITRQRIVK IQAHVRGHQV RKHYKKIIWS VGIVEKVILR WRRKGSGLRG FRPEGLIEGP  960
KDQTIPKKED DDDFLREGRR QTEVRMEKAL ARVKSMVQYP EARDQYRRLV TVVTQLQESK  1020
VYSLFIQFYV WKIYIHTTQF SGIHIMTPKR FTYTPLNSYV FT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00042PBMTransfer from AT2G22300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795548.10.0PREDICTED: calmodulin-binding transcription activator 3-like isoform X2
TrEMBLM0T5T80.0M0T5T8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P10390_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1